Stem-loop ata-MIR171a

Accession

MI0031698

Description

Aegilops tauschii ata-MIR171a precursor miRNA

Sequence

gacgacaugcUGGUAUUGUUUCGGCUCAUGuccucgucgagcacaucgucggaugagaugUGAGCCGAACCAAUAUCACUCauguauucuu
((..(((((.((((((((.(((((((((((((.(((((..((.....))..)))))))))))))))))).))))))))..)))))..))..

Structure

--  cg     -c        U             c     ga  a 
  ga  acaug  UGGUAUUG UUCGGCUCAUGuc ucguc  gc c
  ||  |||||  |||||||| ||||||||||||| |||||  || a
  cu  uguaC  ACUAUAAC AAGCCGAGUguag aguag  ug u
uu  ua     UC        C             -     gc  c 

Annotation confidence Not enough data

Genome context

chr2: 424680735-424680825 [-]

Mature ata-miR171a-5p

• Accession: MIMAT0037190
• Description: Aegilops tauschii ata-miR171a-5p mature miRNA
• Sequence: 11 - UGGUAUUGUUUCGGCUCAUG - 30
• Evidence: experimental ; Illumina [1]

Mature ata-miR171a-3p

• Accession: MIMAT0037191
• Description: Aegilops tauschii ata-miR171a-3p mature miRNA
• Sequence: 61 - UGAGCCGAACCAAUAUCACUC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95