miRBase entry: ata-MIR9677

Stem-loop ata-MIR9677


Accession
MI0031715
Description
Aegilops tauschii ata-MIR9677 precursor miRNA


Sequence

ggccucgcuucucUUCCACUCUACCAACAGCCACGucucccccgcgaccauggcgUGGCCGUUGGUAGAGUAGGAGAcgagcauggc
.(((..((((.(((((.(((((((((((.((((((((..............)))))))).))))))))))).))))).))))..)))

Structure
g   uc    c     C           A        uccccc 
 gcc  gcuu ucUUC ACUCUACCAAC GCCACGuc      g
 |||  |||| ||||| ||||||||||| ||||||||       
 cgg  cgag AGAGG UGAGAUGGUUG CGGUgcgg      c
-   ua    c     A           C        uaccag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 109677717-109677803 [-]

Database links

Mature ata-miR9677-5p

Accession MIMAT0037224
Description Aegilops tauschii ata-miR9677-5p mature miRNA
Sequence 14 - UUCCACUCUACCAACAGCCACG - 35
Evidence experimental
Illumina [1]

Mature ata-miR9677-3p

Accession MIMAT0037225
Description Aegilops tauschii ata-miR9677-3p mature miRNA
Sequence 56 - UGGCCGUUGGUAGAGUAGGAGA - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23535592
    Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
    "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
    "Nature (2013) 496:91-95