Stem-loop ata-MIR394

Accession

MI0031720

Description

Aegilops tauschii ata-MIR394 precursor miRNA

Sequence

cgagagcucuUUGGCAUUCUGUCCACCUCCuugugaaucuugcaggggagaucucacgaucugucgagcuugcggguugcuuggAGGUGGGCAUACUGCCAAUGGagcuguguag
..(.((((((((((((...(((((((((((..((((..(((((((((.(((((....))))).)....))))))))))))..)))))))))))...)))))).)))))).)....

Structure

--cg g      -      UUC           uu    au        ---- g     u 
    a agcucu UUGGCA   UGUCCACCUCC  guga  cuugcagg    g agauc c
    | |||||| ||||||   |||||||||||  ||||  ||||||||    | |||||  
    u ucgaGG AACCGU   ACGGGUGGAgg  cguu  gggcguuc    u ucuag a
gaug g      U      CAU           uu    --        gagc g     c 

Annotation confidence Not enough data

Genome context

AOCO02001108.1: 10953161-10953275 [+]

Mature ata-miR394-5p

• Accession: MIMAT0037234
• Description: Aegilops tauschii ata-miR394-5p mature miRNA
• Sequence: 11 - UUGGCAUUCUGUCCACCUCC - 30
• Evidence: experimental ; Illumina [1]

Mature ata-miR394-3p

• Accession: MIMAT0037235
• Description: Aegilops tauschii ata-miR394-3p mature miRNA
• Sequence: 85 - AGGUGGGCAUACUGCCAAUGG - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95