Stem-loop ata-MIR166c

Accession

MI0031727

Description

Aegilops tauschii ata-MIR166c precursor miRNA

Literature search

1 open access papers mention ata-MIR166c
(1 sentences)

Sequence

cgguuuguggGGAACGUUGGCUGGCUCGAGGcauccuugccgacggcgcgggucgaggcgUCGGACCAGGCUUCAUUCCUUucaaaccgcc
(((((((.((((((.(..(.((((.((((.((((((.((((...)))).))))....)).)))).)))).)..).)))))).)))))))..

Structure

--       u      C UU G    C    G  ----    u    g 
  cgguuug ggGGAA G  G CUGG UCGA Gc    aucc ugcc  
  ||||||| |||||| |  | |||| |||| ||    |||| |||| a
  gccaaac UUCCUU C  C GACC GGCU cg    uggg gcgg  
cc       u      A UU G    A    g  gagc    c    c 

Annotation confidence Not enough data

Genome context

chr6: 322577448-322577538 [+]

Mature ata-miR166c-5p

• Accession: MIMAT0037248
• Description: Aegilops tauschii ata-miR166c-5p mature miRNA
• Sequence: 11 - GGAACGUUGGCUGGCUCGAGG - 31
• Evidence: experimental ; Illumina [1]

Mature ata-miR166c-3p

• Accession: MIMAT0037249
• Description: Aegilops tauschii ata-miR166c-3p mature miRNA
• Sequence: 61 - UCGGACCAGGCUUCAUUCCUU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95