Stem-loop ata-MIR169h

Accession

MI0031729

Description

Aegilops tauschii ata-MIR169h precursor miRNA

Literature search

1 open access papers mention ata-MIR169h
(1 sentences)

Sequence

gggcagaaugUAGCCAAGGAUGACUUGCCGGguaugugcauguaugcuucauggugaggguaugcaucccugcuuugaauccaugcugauauuuuccgGCAAGUUGUUCUUGGCUAGCaucuuguccu
((((((.(((((((((((((((((((((((((.((((.((.(((((.((((.(((.((((.......))))))).))))..)))))))))))..))))))))))))))))))))).)))).)))))).

Structure

-      a    -                     -u    g  u     -c    u   g    ua 
 gggcag augU AGCCAAGGAUGACUUGCCGGg  augu ca guaug  uuca ggu aggg  u
 |||||| |||| |||||||||||||||||||||  |||| || |||||  |||| ||| ||||  g
 ccuguu uaCG UCGGUUCUUGUUGAACGgccu  uaua gu cguac  aagu ucg uccc  c
u      c    A                     uu    -  -     cu    u   -    ua 

Annotation confidence Not enough data

Genome context

chr7: 430309495-430309622 [-]

Mature ata-miR169h-5p

• Accession: MIMAT0037252
• Description: Aegilops tauschii ata-miR169h-5p mature miRNA
• Sequence: 11 - UAGCCAAGGAUGACUUGCCGG - 31
• Evidence: experimental ; Illumina [1]

Mature ata-miR169h-3p

• Accession: MIMAT0037253
• Description: Aegilops tauschii ata-miR169h-3p mature miRNA
• Sequence: 99 - GCAAGUUGUUCUUGGCUAGC - 118
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95