Stem-loop ata-MIR5084

Accession

MI0031730

Description

Aegilops tauschii ata-MIR5084 precursor miRNA

Sequence

agacggguuaggAUCCUCUACAGUACUGUACGGUGCucuuagucacugccaugugggaccuggccccacauaucauccacacuacagcACCAUACGGUACUGCAGAGGAUCucaaccccuc
.((.(((((.(((((((((.((((((((((.((((((..((((...((..(((((((.......)))))))..)).....)))).)))))).)))))))))).))))))))).))))).))

Structure

a  c     a         A          C      cu    --cac  cc       ac 
 ga ggguu ggAUCCUCU CAGUACUGUA GGUGCu  uagu     ug  auguggg  c
 || ||||| ||||||||| |||||||||| ||||||  ||||     ||  |||||||  u
 cu cccaa uCUAGGAGA GUCAUGGCAU CCAcga  auca     ac  uacaccc  g
-  c     c         C          A      -c    caccu  ua       cg 

Annotation confidence Not enough data

Genome context

AOCO02019250.1: 1986563-1986683 [-]

Mature ata-miR5084-5p

• Accession: MIMAT0037254
• Description: Aegilops tauschii ata-miR5084-5p mature miRNA
• Sequence: 13 - AUCCUCUACAGUACUGUACGGUGC - 36
• Evidence: experimental ; Illumina [1]

Mature ata-miR5084-3p

• Accession: MIMAT0037255
• Description: Aegilops tauschii ata-miR5084-3p mature miRNA
• Sequence: 89 - ACCAUACGGUACUGCAGAGGAUC - 111
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95