miRBase entry: ata-MIR9674b

Stem-loop ata-MIR9674b


Accession
MI0031731
Description
Aegilops tauschii ata-MIR9674b precursor miRNA


Sequence

ggcggcugcugcugccccacgauggguaggauggccGGUGCUAUGGAUAGCUUCAACccgauguucgugccacaccgcguccgucgugagucaagcagggagccaauccucuggcUGAAUUUGUCCAUAGCAUCAGcaccggccgu
((((((....))))))((((.....)).))(((((((((((((((((((((((..((((((((..((((......))))..))))).).)).))))....(((((......))))).....)))))))......))))))))))))

Structure
ggcggcugcugcugccccacgauggguagg            ------       -------------------------    CA  - -     uu    cc 
                              auggccGGUGCU      AUGGAUA                         GCUU  AC c cgaug  cgug  a
                              ||||||||||||      |||||||                         ||||  || | |||||  ||||   
                              ugccggccacGA      UACCUGU                         cgaa  ug g gcugc  gcgc  c
------------------------------            CUACGA       UUAAGUcggucuccuaaccgaggga    -c  a u     cu    ca 


Annotation confidence Not enough data
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Genome context
chr4: 409005913-409006058 [-]

Database links

Mature ata-miR9674b-5p

Accession MIMAT0037256
Description Aegilops tauschii ata-miR9674b-5p mature miRNA
Sequence 37 - GGUGCUAUGGAUAGCUUCAAC - 57
Evidence experimental
Illumina [1]

Mature ata-miR9674b-3p

Accession MIMAT0037257
Description Aegilops tauschii ata-miR9674b-3p mature miRNA
Sequence 116 - UGAAUUUGUCCAUAGCAUCAG - 136
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23535592
    Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
    "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
    "Nature (2013) 496:91-95