Stem-loop api-mir-3021-2

Accession

MI0031736

Description

Acyrthosiphon pisum api-mir-3021-2 precursor miRNA

Sequence

20 reads, 9.0 reads per million, 4 experiments

UUGUCUUGUGUAGUCCAUGAUAGCAUCgaaaccauccuccauggaaaauggacagcgcgggucauuc
.((.(((((((.((((((.....(((.((........)).)))....)))))).))))))).))...

Structure

--U  U       A      GAUAG   C  aac 
   UG CUUGUGU GUCCAU     CAU ga   c
   || ||||||| ||||||     ||| ||    
   ac gggcgcg caggua     gua cu   a
cuu  u       a      -aaag   c  ccu 

Annotation confidence Not enough data

Genome context

GL349658.1: 813385-813451 [-]

Mature api-miR-3021-5p

• Accession: MIMAT0014757
• Description: Acyrthosiphon pisum api-miR-3021-5p mature miRNA
• Sequence: 1 - UUGUCUUGUGUAGUCCAUGAUAGCAUC - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281