Stem-loop fru-mir-124-4

Accession

MI0031746

Description

Fugu rubripes fru-mir-124-4 precursor miRNA

Sequence

180639 reads, 1633.0 reads per million, 12 experiments

gguugugucucucCGUGUUCACAGCGGACCUUGAUuuaaugucuuacaauUAAGGCACGCGGUGAAUGCCAAgagau
......((((((..((((((((.(((..(((((((((((....))).))))))))..))).))))))))..))))))

Structure

gguugu      cC        A   GA        -   u 
      gucucu  GUGUUCAC GCG  CCUUGAUu uaa g
      ||||||  |||||||| |||  |||||||| |||  
      uagagA  CGUAAGUG CGC  GGAAUuaa auu u
------      AC        G   AC        c   c 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042287.1|: 12321674-12321750 [-]

Mature fru-miR-124-5p

• Accession: MIMAT0052810
• Description: Fugu rubripes fru-miR-124-5p mature miRNA
• Sequence: 14 - CGUGUUCACAGCGGACCUUGAU - 35
• Evidence: not_experimental

Mature fru-miR-124-3p

• Accession: MIMAT0002896
• Description: Fugu rubripes fru-miR-124-3p mature miRNA
• Sequence: 51 - UAAGGCACGCGGUGAAUGCCAA - 72
• Evidence: not_experimental

References