Stem-loop rno-mir-676

Accession

MI0031786

Description

Rattus norvegicus rno-mir-676 precursor miRNA

Literature search

6 open access papers mention rno-mir-676
(11 sentences)

Sequence

273173 reads, 317.0 reads per million, 502 experiments

cuucaccugaaugcaugaCUCUGCAACCUUAGGACUUGCagaauuaacagaaugCCGUCCUGAGCUUGUCGAGCUaugcguuucugggc
.....((.(((((((((.(((.((((.((((((((..(((............))).)))))))).)))).))).)))))))))..))..

Structure

cuuca  -u         a   U    C        UU   gaauu 
     cc  gaaugcaug CUC GCAA CUUAGGAC  GCa     a
     ||  ||||||||| ||| |||| ||||||||  |||      
     gg  uuugcguaU GAG UGUU GAGUCCUG  Cgu     a
---cg  uc         C   C    C        -C   aagac 

Annotation confidence High

Genome context

chrX: 70207015-70207103 [+]

Mature rno-miR-676-5p

• Accession: MIMAT0061442
• Description: Rattus norvegicus rno-miR-676-5p mature miRNA
• Sequence: 19 - CUCUGCAACCUUAGGACUUGC - 39
• Evidence: experimental ; Illumina [1]

Mature rno-miR-676-3p

• Accession: MIMAT0037264
• Description: Rattus norvegicus rno-miR-676-3p mature miRNA
• Sequence: 55 - CCGUCCUGAGCUUGUCGAGCU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23799049
   Distinctive profile of IsomiR expression and novel microRNAs in rat heart left ventricle
   McGahon MK, Yarham JM, Daly A, Guduric-Fuchs J, Ferguson LJ, Simpson DA, Collins A
   PLoS One (2013) 8:e65809