Stem-loop rno-mir-486

Accession

MI0031787

Description

Rattus norvegicus rno-mir-486 precursor miRNA

Literature search

128 open access papers mention rno-mir-486
(322 sentences)

Sequence

50921117 reads, 54533.0 reads per million, 517 experiments

gcaUCCUGUACUGAGCUGCCCCGAGcugagcacaaugaaggaccuCGGGGCAGCUCAGUACAGGAccc
...((((((((((((((((((((((((...........))...))))))))))))))))))))))...

Structure

gca                      ---  gagc 
   UCCUGUACUGAGCUGCCCCGAG   cu    a
   ||||||||||||||||||||||   ||    c
   AGGACAUGACUCGACGGGGCuc   ga    a
ccc                      cag  agua 

Annotation confidence High

Genome context

Unknown

Mature rno-miR-486-5p

• Accession: MIMAT0037265
• Description: Rattus norvegicus rno-miR-486-5p mature miRNA
• Sequence: 4 - UCCUGUACUGAGCUGCCCCGAG - 25
• Evidence: experimental ; Illumina [1]

Mature rno-miR-486-3p

• Accession: MIMAT0061443
• Description: Rattus norvegicus rno-miR-486-3p mature miRNA
• Sequence: 46 - CGGGGCAGCUCAGUACAGGA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23799049
   Distinctive profile of IsomiR expression and novel microRNAs in rat heart left ventricle
   McGahon MK, Yarham JM, Daly A, Guduric-Fuchs J, Ferguson LJ, Simpson DA, Collins A
   PLoS One (2013) 8:e65809