Stem-loop ame-mir-9864

Accession

MI0031788

Description

Apis mellifera ame-mir-9864 precursor miRNA

Sequence

1518 reads, 17.0 reads per million, 24 experiments

agcgugccucUUUCGAGGCUGUUUAAAUGGAUUcacauugugcaacucgacggcauaaaUCCAUUUAAGUCGUUCGAAAGAggcuggcugu
(((..((((((((((((....((((((((((((.....(((((.........)))))))))))))))))...))))))))))))..)))..

Structure

--   gu            GCUG            cacau     aac 
  agc  gccucUUUCGAG    UUUAAAUGGAUU     ugugc   u
  |||  ||||||||||||    ||||||||||||     |||||   c
  ucg  cggAGAAAGCUU    GAAUUUACCUaa     auacg   g
ug   gu            -GCU            -----     gca 

Annotation confidence High

Genome context

CM000055.5: 4683012-4683102 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ame-mir-9864

Mature ame-miR-9864-5p

• Accession: MIMAT0037266
• Description: Apis mellifera ame-miR-9864-5p mature miRNA
• Sequence: 11 - UUUCGAGGCUGUUUAAAUGGAUU - 33
• Evidence: experimental ; Illumina [1]

Mature ame-miR-9864-3p

• Accession: MIMAT0053120
• Description: Apis mellifera ame-miR-9864-3p mature miRNA
• Sequence: 60 - UCCAUUUAAGUCGUUCGAAAGA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24136738
   The integrative analysis of microRNA and mRNA expression in Apis mellifera following maze-based visual pattern learning
   "Qin QH, Wang ZL, Tian LQ, Gan HY, Zhang SW, Zeng ZJ"
   "Insect Sci (2014) 21:619-636