Stem-loop ame-mir-9878

Accession

MI0031804

Description

Apis mellifera ame-mir-9878 precursor miRNA

Sequence

1120 reads, 16.0 reads per million, 24 experiments

uaaaaauaucUAAAUAGAUCCAAACAUCCGAAUAucuguaaauaguuuaUUGGGAUGUUGAAUCUGUUGCAGAcucgggugc
........(((.(((((((.(((.(((((.((((.(((....)))..)))).)))))))).)))))))..))).........

Structure

-uaaaaaua   -A       C   A     G    -u   u 
         ucU  AAUAGAU CAA CAUCC AAUA  cug a
         |||  ||||||| ||| ||||| ||||  |||  
         AGA  UUGUCUA GUU GUAGG UUau  gau a
cgugggcuc   CG       A   -     G    uu   a 

Annotation confidence High

Genome context

CM000065.5: 7528176-7528257 [+]

Mature ame-miR-9878-5p

• Accession: MIMAT0053123
• Description: Apis mellifera ame-miR-9878-5p mature miRNA
• Sequence: 11 - UAAAUAGAUCCAAACAUCCGAAUA - 34
• Evidence: experimental ; Illumina [1]

Mature ame-miR-9878-3p

• Accession: MIMAT0037282
• Description: Apis mellifera ame-miR-9878-3p mature miRNA
• Sequence: 50 - UUGGGAUGUUGAAUCUGUUGCAGA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24136738
   The integrative analysis of microRNA and mRNA expression in Apis mellifera following maze-based visual pattern learning
   "Qin QH, Wang ZL, Tian LQ, Gan HY, Zhang SW, Zeng ZJ"
   "Insect Sci (2014) 21:619-636