Stem-loop ame-mir-9888

Accession

MI0031815

Description

Apis mellifera ame-mir-9888 precursor miRNA

Sequence

417 reads, 6.0 reads per million, 24 experiments

aggugagcggUGGUGGUCAAGCAAGUAGAACGUuagaggaacguagaCGUUCUAUGCUUGACCAUCAUUggccaguucc
.(((...((((((((((((((((..(((((((((...........))))))))))))))))))))))))))))......

Structure

-----a   gag                AG         agag 
      ggu   cggUGGUGGUCAAGCA  UAGAACGUu    g
      |||   ||||||||||||||||  |||||||||    a
      ccg   gUUACUACCAGUUCGU  AUCUUGCag    a
ccuuga   ---                --         augc 

Annotation confidence High

Genome context

CM000058.5: 4859722-4859800 [+]

Mature ame-miR-9888-5p

• Accession: MIMAT0037293
• Description: Apis mellifera ame-miR-9888-5p mature miRNA
• Sequence: 11 - UGGUGGUCAAGCAAGUAGAACGU - 33
• Evidence: experimental ; Illumina [1]

Mature ame-miR-9888-3p

• Accession: MIMAT0053126
• Description: Apis mellifera ame-miR-9888-3p mature miRNA
• Sequence: 48 - CGUUCUAUGCUUGACCAUCAUU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24136738
   The integrative analysis of microRNA and mRNA expression in Apis mellifera following maze-based visual pattern learning
   "Qin QH, Wang ZL, Tian LQ, Gan HY, Zhang SW, Zeng ZJ"
   "Insect Sci (2014) 21:619-636