miRBase entry: ame-mir-3478

Stem-loop ame-mir-3478

Accession

MI0031824

Description

Apis mellifera ame-mir-3478 precursor miRNA

Sequence

aggcggacauuggaugaauccuacccggugagguuuuuuuuuuccaacCACACCGGACGAGAUUUCAUccgacagcag
..((.....(((((((((..((..((((((.((((..........)))).))))))...))..)))))))))..))..

Structure

ag  ggaca         uc  -ac      a    uuuu 
  gc     uuggaugaa  cu   ccggug gguu    u
  ||     |||||||||  ||   |||||| ||||     
  cg     agccUACUU  GA   GGCCAC Ccaa    u
ga  ---ac         UA  GCA      A    ccuu

Annotation confidence Not enough data

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Genome context

CM000066.5: 1395549-1395626 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ame-mir-3478

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ame-miR-3478-3p

Accession	MIMAT0037302
Description	Apis mellifera ame-miR-3478-3p mature miRNA
Sequence	49 - CACACCGGACGAGAUUUCAU - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 24136738
The integrative analysis of microRNA and mRNA expression in Apis mellifera following maze-based visual pattern learning
"Qin QH, Wang ZL, Tian LQ, Gan HY, Zhang SW, Zeng ZJ"
"Insect Sci (2014) 21:619-636