Stem-loop hsa-mir-9899

Accession

MI0031827

Description

Homo sapiens hsa-mir-9899 precursor miRNA

Sequence

716 reads, 7.0 reads per million, 67 experiments

gucugcaaacuccggccAGCGGGAGCCGACCGCCCGGCgcagguggggcaccCGGGCGCCGCGCUCCCGCCCGCagggugagcggaacuggagaga
.(((((..((((..((..((((((((((..(((((((.((.......))..))))))).)).))))))))..)).))))..)))))..........

Structure

---------g     aa    cg  cA        -  AC       -C  ag 
          ucugc  acuc  gc  GCGGGAGC CG  CGCCCGG  gc  g
          |||||  ||||  ||  |||||||| ||  |||||||  ||  u
          aggcg  uggg  CG  CGCCCUCG GC  GCGGGCc  cg  g
agagagguca     ag    -a  CC        C  -C       ca  gg 

Annotation confidence Medium

Genome context

chr2: 149330278-149330373 [-]

Mature hsa-miR-9899-5p

• Accession: MIMAT0050670
• Description: Homo sapiens hsa-miR-9899-5p mature miRNA
• Sequence: 18 - AGCGGGAGCCGACCGCCCGGC - 38
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-9899-3p

• Accession: MIMAT0039319
• Description: Homo sapiens hsa-miR-9899-3p mature miRNA
• Sequence: 53 - CGGGCGCCGCGCUCCCGCCCGC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25049417
   PAPD5-mediated 3' adenylation and subsequent degradation of miR-21 is disrupted in proliferative disease
   "Boele J, Persson H, Shin JW, Ishizu Y, Newie IS, Sokilde R, Hawkins SM, Coarfa C, Ikeda K, Takayama K, Horie-Inoue K, Ando Y, Burroughs AM, Sasaki C, Suzuki C, Sakai M, Aoki S, Ogawa A, Hasegawa A, Lizio M, Kaida K, Teusink B, Carninci P, Suzuki H, Inoue "
   "Proc Natl Acad Sci U S A (2014) 111:11467-11472