Accession
MI0031833
Description
Callithrix jacchus
cja-let-7a-2 precursor miRNA
Sequence
120735
reads,
11555.0
reads per million, 1 experiments
ccgagaccgacugcccuuuggggUGAGGUAGUAGGUUGUAUAGUUuggggcucugcccuccuguggaguaaCUAUGCAAUCUACUGUCUUUCcugaaguggcuguaauaucugcgg
((((((...((.(((((((((((.(((((((((((((((((((((....(((((((......)))))))))))))))))))))))))))))))))))).))).))....))).)))
((((((...((.(((((((((((.(((((((((((((((((((((....(((((((......)))))))))))))))))))))))))))))))))))).))).))....))).)))
Structure
- -ccg u - U uggg cc ccg aga ac gcc cuuugggg GAGGUAGUAGGUUGUAUAGUU gcucugc u ||| ||| || ||| |||||||| ||||||||||||||||||||| ||||||| ggc ucu ug cgg gaagucCU UUCUGUCAUCUAACGUAUCaa ugaggug c g auaa u u - ---- uc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_071442.1|: 211354142-211354257 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-let-7a-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cja-let-7a-5p
| Accession | MIMAT0039324 |
| Description | Callithrix jacchus cja-let-7a-5p mature miRNA |
| Sequence | 24 - UGAGGUAGUAGGUUGUAUAGUU - 45 |
| Evidence |
experimental
Illumina [1-2] |
Mature cja-let-7a-2-3p
| Accession | MIMAT0061507 |
| Description | Callithrix jacchus cja-let-7a-2-3p mature miRNA |
| Sequence | 72 - CUAUGCAAUCUACUGUCUUUC - 92 |
| Evidence |
experimental
Illumina [1-2] |
References
|
