miRBase entry: cja-mir-519a

Stem-loop cja-mir-519a

Accession

MI0031837

Description

Callithrix jacchus cja-mir-519a precursor miRNA

Sequence

ucucaggccgugacccucuacaaggaagcacuuccuguugucagaaagaaaagAAAGUGCAUCCUUGUACAGGGUuacugucugaga
((((((((.((((((((.((((((((.((((((.((....((.....))..)).)))))).)))))))).)))))))).))))))))

Structure

        c        c        a      c  guug  a 
ucucaggc gugacccu uacaagga gcacuu cu    uc g
|||||||| |||||||| |||||||| |||||| ||    || a
agagucug cauUGGGA AUGUUCCU CGUGAA ga    ag a
        u        C        A      A  --aa  a

Annotation confidence Not enough data

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Genome context

chr22: 44898890-44898976 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from cja-mir-519a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-519a

Accession	MIMAT0039328
Description	Callithrix jacchus cja-miR-519a mature miRNA
Sequence	54 - AAAGUGCAUCCUUGUACAGGGU - 75
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857