Stem-loop cja-mir-519a

Accession

MI0031837

Description

Callithrix jacchus cja-mir-519a precursor miRNA

Sequence

ucucaggccgugacccucuacaaggaagcacuuccuguugucagaaagaaaagAAAGUGCAUCCUUGUACAGGGUuacugucugaga
((((((((.((((((((.((((((((.((((((.((....((.....))..)).)))))).)))))))).)))))))).))))))))

Structure

        c        c        a      c  guug  a 
ucucaggc gugacccu uacaagga gcacuu cu    uc g
|||||||| |||||||| |||||||| |||||| ||    || a
agagucug cauUGGGA AUGUUCCU CGUGAA ga    ag a
        u        C        A      A  --aa  a 

Annotation confidence Not enough data

Genome context

chr22: 44898890-44898976 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from cja-mir-519a

Mature cja-miR-519a

• Accession: MIMAT0039328
• Description: Callithrix jacchus cja-miR-519a mature miRNA
• Sequence: 54 - AAAGUGCAUCCUUGUACAGGGU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857