Stem-loop cja-mir-1323

Accession

MI0031840

Description

Callithrix jacchus cja-mir-1323 precursor miRNA

Sequence

auucacgcugagguccUCAAAACUGAGGGGCAUUUUCUguggucuaaaaggaaaaugcaccccaguuuugugguucucaauugugaau
(((((((.(((((.((.((((((((.((((((((((((...........))))))))).))))))))))).)).)))))..)))))))

Structure

       -c     u  U        A   -         gugg 
auucacg  ugagg cc CAAAACUG GGG GCAUUUUCU    u
|||||||  ||||| || |||||||| ||| |||||||||    c
uaagugu  acucu gg guuuugac ccc cguaaaagg    u
       ua     u  u        -   a         aaaa 

Annotation confidence Not enough data

Genome context

chr22: 44878663-44878750 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-1323

Mature cja-miR-1323

• Accession: MIMAT0039331
• Description: Callithrix jacchus cja-miR-1323 mature miRNA
• Sequence: 17 - UCAAAACUGAGGGGCAUUUUCU - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857