miRBase entry: cja-mir-513b-1

Stem-loop cja-mir-513b-1

Accession

MI0031841

Description

Callithrix jacchus cja-mir-513b-1 precursor miRNA

Sequence

gugcagugcccUUCACAAGGAGCUGUCAUUCAuguggacuaaaaccugaaugccgccuucuugagaagaguaauguac
(((((.(((.((((.(((((((.((.((((((.((........)).)))))).)).))))))).)))).))).)))))

Structure

     g   c    A       C  U      u  gga 
gugca ugc cUUC CAAGGAG UG CAUUCA gu   c
||||| ||| |||| ||||||| || |||||| ||    
caugu aug gaag guucuuc gc guaagu ca   u
     a   a    a       c  c      c  aaa

Annotation confidence Not enough data

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Genome context

chrX: 134409132-134409209 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-513b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-513b-5p

Accession	MIMAT0039332
Description	Callithrix jacchus cja-miR-513b-5p mature miRNA
Sequence	12 - UUCACAAGGAGCUGUCAUUCA - 32
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857