Stem-loop cja-mir-513b-2

Accession

MI0031842

Description

Callithrix jacchus cja-mir-513b-2 precursor miRNA

Sequence

gggaugccacauucagccauucagcaugcagugcccUUCACAAGGAGCUGUCAUUCAugucaacuaaaauaugaaugucaccuucuugagaagaguaauguacagcauguacugcgcaugugguguccc
((((((((((((...((((....((((((.(((((((((.(((((((.((.(((((((((........))))))))).)).))))))).)))).)....)))).))))))..)).))))))))))))))

Structure

            uca  -  uuca      a    ---- -    A       C  U         caa 
gggaugccacau   gc ca    gcaugc gugc    c cUUC CAAGGAG UG CAUUCAugu   c
||||||||||||   || ||    |||||| ||||    | |||| ||||||| || |||||||||    
cccuguggugua   cg gu    uguacg caug    g gaag guucuuc ac guaaguaua   u
            ---  c  --ca      a    uaau a    a       c  u         aaa 

Annotation confidence Not enough data

Genome context

chrX: 134336704-134336832 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from cja-mir-513b-2

Mature cja-miR-513b-5p

• Accession: MIMAT0039332
• Description: Callithrix jacchus cja-miR-513b-5p mature miRNA
• Sequence: 37 - UUCACAAGGAGCUGUCAUUCA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857