miRBase entry: cja-mir-513a-3

Stem-loop cja-mir-513a-3

Accession

MI0031845

Description

Callithrix jacchus cja-mir-513a-3 precursor miRNA

Sequence

ugcccUUCACAAGGAGGUGUCAUUCAUgugaacuaaaauaUGAUGACACCUUCUUGAGAAGAgua
(((.((((.((((((((((((((.(((((........))))))))))))))))))).)))).)))

Structure

   c    A              U     gaa 
ugc cUUC CAAGGAGGUGUCAU CAUgu   c
||| |||| |||||||||||||| |||||    
aug GAAG GUUCUUCCACAGUA GUaua   u
   A    A              -     aaa

Annotation confidence Not enough data

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Genome context

chrX: 134313924-134313988 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-513a-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-513a-5p

Accession	MIMAT0039333
Description	Callithrix jacchus cja-miR-513a-5p mature miRNA
Sequence	6 - UUCACAAGGAGGUGUCAUUCAU - 27
Evidence	experimental Illumina [1]

Mature cja-miR-513a-3p

Accession	MIMAT0039334
Description	Callithrix jacchus cja-miR-513a-3p mature miRNA
Sequence	41 - UGAUGACACCUUCUUGAGAAGA - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857