miRBase entry: cja-mir-495

Stem-loop cja-mir-495

Accession

MI0031851

Description

Callithrix jacchus cja-mir-495 precursor miRNA

Sequence

ugguaccugaaaagaaguugcccauguuauuuucgcuuuauaugugacgAAACAAACAUGGUGCACUUCUUuuucgguauca
(((((((.((((((((((.(((((((((..((((((.........).)))))..))))))).)))))))))))).)))))))

Structure

       u          u  -       au     - uuu 
ugguacc gaaaagaagu gc ccauguu  uuucg c   a
||||||| |||||||||| || |||||||  ||||| |   u
acuaugg uuuUUCUUCA CG GGUACAA  AAAgc g   a
       c          -  U       AC     a ugu

Annotation confidence Not enough data

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Genome context

chr10: 126951781-126951862 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from cja-mir-495

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-495

Accession	MIMAT0039338
Description	Callithrix jacchus cja-miR-495 mature miRNA
Sequence	50 - AAACAAACAUGGUGCACUUCUU - 71
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857