Stem-loop cja-mir-216b

Accession

MI0031855

Description

Callithrix jacchus cja-mir-216b precursor miRNA

Sequence

1050 reads, 100.0 reads per million, 1 experiments

cuucaaaguggcagacuggaAAAUCUCUGCAGGCAAAUGUGAugucacugaagaaaucACACAGUUACCCGCAGAGAUUCUacagucugacaccuucaag
.......(((.(((((((...(((((((((.((.((.((((((.((......)).))))))...)).)).)))))))))...))))))).))).......

Structure

cuucaaa   g       gaA         A  C  --A      g  ac 
       gug cagacug   AAUCUCUGC GG AA   UGUGAu uc  u
       ||| |||||||   ||||||||| || ||   |||||| ||   
       cac gucugac   UUAGAGACG CC UU   ACAcua ag  g
gaacuuc   a       aUC         C  A  GAC      a  aa 

Annotation confidence High

Genome context

ref|NC_071455.1|: 56247988-56248087 [+]

Mature cja-miR-216b-5p

• Accession: MIMAT0039342
• Description: Callithrix jacchus cja-miR-216b-5p mature miRNA
• Sequence: 21 - AAAUCUCUGCAGGCAAAUGUGA - 42
• Evidence: experimental ; Illumina [1]

Mature cja-miR-216b-3p

• Accession: MIMAT0061511
• Description: Callithrix jacchus cja-miR-216b-3p mature miRNA
• Sequence: 59 - ACACAGUUACCCGCAGAGAUUCU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857