Stem-loop cja-mir-181c

Accession

MI0031857

Description

Callithrix jacchus cja-mir-181c precursor miRNA

Sequence

ggguuugggggAACAUUCAACCUGUCGGUGAGUuugggcagcucaggcaaaccaucgaccguugaguggacccugagaccu
((((((.((((..((((((((..(((((((.(((((...........)))))))))))).))))))))..)))).))))))

Structure

      g    AA        CU       A     ggca 
ggguuu gggg  CAUUCAAC  GUCGGUG GUuug    g
|||||| ||||  ||||||||  ||||||| |||||    c
uccaga uccc  gugaguug  cagcuac caaac    u
      g    ag        -c       -     ggac 

Annotation confidence Not enough data

Genome context

chr22: 13111853-13111933 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-181c

Mature cja-miR-181c

• Accession: MIMAT0039344
• Description: Callithrix jacchus cja-miR-181c mature miRNA
• Sequence: 12 - AACAUUCAACCUGUCGGUGAGU - 33
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596