Stem-loop cja-mir-181a-1

Accession

MI0031858

Description

Callithrix jacchus cja-mir-181a-1 precursor miRNA

Sequence

ugagguugcuucagugAACAUUCAACGCUGUCGGUGAGUuuggaauuaaaaucaaaaccaucgaccguugauuguacccuauggcuaaccauca
((((((((((..((.(.(((.((((((..(((((((.((((.((.......)).))))))))))))))))).))).).))..))).)))).)))

Structure

   -    -   uc  u A   U      CU       A    g  au 
uga gguu gcu  ag g ACA UCAACG  GUCGGUG GUuu ga  u
||| |||| |||  || | ||| ||||||  ||||||| |||| ||  a
acu ccaa cgg  uc c ugu aguugc  cagcuac caaa cu  a
   a    u   ua  c a   u      --       -    a  aa 

Annotation confidence Not enough data

Genome context

chr19: 20359354-20359447 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-181a-1

Mature cja-miR-181a

• Accession: MIMAT0039345
• Description: Callithrix jacchus cja-miR-181a mature miRNA
• Sequence: 17 - AACAUUCAACGCUGUCGGUGAGU - 39
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596