Stem-loop cja-mir-181b-2

Accession

MI0031861

Description

Callithrix jacchus cja-mir-181b-2 precursor miRNA

Sequence

uggcugcacucAACAUUCAUUGCUGUCGGUGGguuugagucugaaucaacucacugaucgaugaaugcaaacugcggacca
((((((((.....(((((((((..(((((((((((.((.......)))))))))))))))))))))).....))))).)))

Structure

   -     cucAA         CU           u  gu 
ugg cugca     CAUUCAUUG  GUCGGUGGguu ga  c
||| |||||     |||||||||  ||||||||||| ||  u
acc ggcgu     guaaguagc  uagucacucaa cu  g
   a     caaac         --           -  aa 

Annotation confidence Not enough data

Genome context

chr1: 168508861-168508941 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-181b-2

Mature cja-miR-181b

• Accession: MIMAT0039346
• Description: Callithrix jacchus cja-miR-181b mature miRNA
• Sequence: 12 - AACAUUCAUUGCUGUCGGUGG - 32
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596