Stem-loop cja-mir-199-2

Accession

MI0031876

Description

Callithrix jacchus cja-mir-199-2 precursor miRNA

Sequence

200 reads, 19.0 reads per million, 1 experiments

gucuaCCCAGUGUUUAGACUAUCUGUUCaggacucccaaauuguACAGUAGUCUGCACAUUGGUUAggc
(((((.(((((((.(((((((.((((.(((..........))).))))))))))).))))))).)))))

Structure

     C       U       U    U   gacu 
gucua CCAGUGU UAGACUA CUGU Cag    c
||||| ||||||| ||||||| |||| |||     
cggAU GGUUACA GUCUGAU GACA guu    c
     U       C       -    u   aaac 

Annotation confidence High

Genome context

ref|NC_071442.1|: 173904907-173904975 [-]

Mature cja-miR-199-2-5p

• Accession: MIMAT0061516
• Description: Callithrix jacchus cja-miR-199-2-5p mature miRNA
• Sequence: 6 - CCCAGUGUUUAGACUAUCUGUUC - 28
• Evidence: experimental ; Illumina [1-2]

Mature cja-miR-199-3p

• Accession: MIMAT0039361
• Description: Callithrix jacchus cja-miR-199-3p mature miRNA
• Sequence: 45 - ACAGUAGUCUGCACAUUGGUUA - 66
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596