Stem-loop cja-mir-219

Accession

MI0031881

Description

Callithrix jacchus cja-mir-219 precursor miRNA

Sequence

ggcccugaacucaggggcuucgccacugauuguccaaacgcaauucuuguaagagucugcggccaaccgAGAAUUGUGGCUGGACAUCUGUggcugagcuccgggcgcaacaggggc
(.(((((..(((.(((((((.(((((.(((.(((((..(((((((((((...(.(((...))))...)))))))))))..)))))))).))))).)))))))))).....))))).)

Structure

 g     ---aa   a       c     u   u     aa           uaa a   u 
g cccug     cuc ggggcuu gccac gau gucca  cgcaauucuug   g guc  
| |||||     ||| ||||||| ||||| ||| |||||  |||||||||||   | ||| g
c gggac     ggg ccucgag cggUG CUA CAGGU  GUGUUAAGAgc   c cgg  
 g     aacgc   -       u     U   -     CG           caa -   c 

Annotation confidence Not enough data

Genome context

chr1: 172335018-172335134 [-]

Mature cja-miR-219

• Accession: MIMAT0039366
• Description: Callithrix jacchus cja-miR-219 mature miRNA
• Sequence: 70 - AGAAUUGUGGCUGGACAUCUGU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857