Stem-loop cja-mir-485

Accession

MI0031882

Description

Callithrix jacchus cja-mir-485 precursor miRNA

Sequence

ugguacuuggagAGAGGCUGGCCGUGAUGAAUUCGauccuucaaagcgagucauacacggcucuccucucuuuuaguguca
(((((((.(((((((((..(((((((((((.((((...........)))))))).)))))))..))))))))).)))))))

Structure

       u         CU       -    A    aucc 
ugguacu ggagAGAGG  GGCCGUG AUGA UUCG    u
||||||| |||||||||  ||||||| |||| ||||    u
acuguga uuucucucc  ucggcac uacu gagc    c
       u         uc       a    -    gaaa 

Annotation confidence Not enough data

Genome context

ref|NC_071451.1|: 131869817-131869897 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from cja-mir-485

Mature cja-miR-485-5p

• Accession: MIMAT0039367
• Description: Callithrix jacchus cja-miR-485-5p mature miRNA
• Sequence: 13 - AGAGGCUGGCCGUGAUGAAUUCG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857