Stem-loop cja-mir-103a-3

Accession

MI0031885

Description

Callithrix jacchus cja-mir-103a-3 precursor miRNA

Sequence

75291 reads, 7206.0 reads per million, 1 experiments

ucucucugcuuucAGCUUCUUUACAGUGUUGCCUUGuggcauggaguucaAGCAGCAUUGUACAGGGCUAUcaaagcacagaga
(((((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).)))))

Structure

     c      --c    U  U           C   u   a 
ucucu ugcuuu   AGCU CU UACAGUGUUGC UUG ggc u
||||| ||||||   |||| || ||||||||||| ||| ||| g
agaga acgaaa   UCGG GA AUGUUACGACG Aac uug g
     c      cUA    -  C           -   -   a 

Annotation confidence High

Genome context

ref|NC_071453.1|: 78925298-78925381 [-]

Mature cja-miR-103a-3-5p

• Accession: MIMAT0061519
• Description: Callithrix jacchus cja-miR-103a-3-5p mature miRNA
• Sequence: 14 - AGCUUCUUUACAGUGUUGCCUUG - 36
• Evidence: experimental ; Illumina [1-2]

Mature cja-miR-103a-3p

• Accession: MIMAT0039369
• Description: Callithrix jacchus cja-miR-103a-3p mature miRNA
• Sequence: 51 - AGCAGCAUUGUACAGGGCUAU - 71
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596