Stem-loop cja-mir-103a-2

Accession

MI0031886

Description

Callithrix jacchus cja-mir-103a-2 precursor miRNA

Sequence

156515 reads, 14979.0 reads per million, 1 experiments

ucuuacugcccucGGCUUCUUUACAGUGCUGCCUuguugcauauggaucaAGCAGCAUUGUACAGGGCUAUgaaggcauugaga
(((((.((((.((((((.((.(((((((((((.(((.(.(....).).)))))))))))))).))))))..)).)))).)))))

Structure

     c    c  --    U  U           C   u g a 
ucuua ugcc uc  GGCU CU UACAGUGCUGC Uug u c u
||||| |||| ||  |||| || ||||||||||| ||| | |  
agagu acgg ag  UCGG GA AUGUUACGACG Aac a g a
     u    a  UA    -  C           -   u g u 

Annotation confidence Not enough data

Genome context

ref|NC_071443.1|: 29491697-29491780 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-103a-2

Mature cja-miR-103a-2-5p

• Accession: MIMAT0061518
• Description: Callithrix jacchus cja-miR-103a-2-5p mature miRNA
• Sequence: 14 - GGCUUCUUUACAGUGCUGCCU - 34
• Evidence: experimental ; Illumina [1-2]

Mature cja-miR-103a-3p

• Accession: MIMAT0039369
• Description: Callithrix jacchus cja-miR-103a-3p mature miRNA
• Sequence: 51 - AGCAGCAUUGUACAGGGCUAU - 71
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596