Stem-loop cja-mir-671

Accession

MI0031889

Description

Callithrix jacchus cja-mir-671 precursor miRNA

Sequence

4643 reads, 444.0 reads per million, 1 experiments

ggaagaggAGGAAGCCCUGGAGGGGCUGGAGgugauggauguuuuccUCCGGUUCUCAGGGCUCCACCucuuuc
((((((((.(((.((((((..(((((((((((.((.......)).)))))))))))))))))))).))))))))

Structure

        A   A      GA           u  ug 
ggaagagg GGA GCCCUG  GGGGCUGGAGg ga  g
|||||||| ||| ||||||  ||||||||||| ||  a
cuuucuCC CCU CGGGAC  UCUUGGCCUcc uu  u
        A   -      --           u  ug 

Annotation confidence High

Genome context

ref|NC_071449.1|: 94286396-94286469 [-]

Mature cja-miR-671-5p

• Accession: MIMAT0039371
• Description: Callithrix jacchus cja-miR-671-5p mature miRNA
• Sequence: 9 - AGGAAGCCCUGGAGGGGCUGGAG - 31
• Evidence: experimental ; Illumina [1]

Mature cja-miR-671-3p

• Accession: MIMAT0061521
• Description: Callithrix jacchus cja-miR-671-3p mature miRNA
• Sequence: 48 - UCCGGUUCUCAGGGCUCCACC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857