Stem-loop cja-mir-296

Accession

MI0031892

Description

Callithrix jacchus cja-mir-296 precursor miRNA

Sequence

282 reads, 27.0 reads per million, 1 experiments

ggugagagaaaggacccuuccggAGGGCCCCCCCUCAAUCCUGUugugccugauucaGAGGGUUGGGUGGAGGCUCUCccgaagggcucuagagaacacc
((((......(((.((((((.((((((((.((.(((((((((.(((.........)))))))))))).)).)))))))).)))))).)))......))))

Structure

    agagaa   a      c        C  C         G   ugc 
ggug      agg cccuuc ggAGGGCC CC CUCAAUCCU Uug   c
||||      ||| |||||| |||||||| || ||||||||| |||   u
ccac      ucu gggaag cCUCUCGG GG GGGUUGGGA Gac   g
    aagaga   c      c        A  U         -   uua 

Annotation confidence High

Genome context

ref|NC_071446.1|: 52135708-52135807 [-]

Mature cja-miR-296-5p

• Accession: MIMAT0039374
• Description: Callithrix jacchus cja-miR-296-5p mature miRNA
• Sequence: 24 - AGGGCCCCCCCUCAAUCCUGU - 44
• Evidence: experimental ; Illumina [1]

Mature cja-miR-296-3p

• Accession: MIMAT0061523
• Description: Callithrix jacchus cja-miR-296-3p mature miRNA
• Sequence: 58 - GAGGGUUGGGUGGAGGCUCUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857