Stem-loop cja-mir-491

Accession

MI0031893

Description

Callithrix jacchus cja-mir-491 precursor miRNA

Sequence

297 reads, 28.0 reads per million, 1 experiments

ggaauugacuuagcuggguAGUGGGGAACCCUUCCAUGAGGAguagaacacucCUUAUGCAAGAUUCCCUUCUACcuggcuggguuggaguc
......(((((((((((((((.((((((..(((.((((((((((.....)))))))))).))).)))))).)))))))))))))))......

Structure

ggaauu               U      CC   C          a 
      gacuuagcuggguAG GGGGAA  CUU CAUGAGGAgu g
      ||||||||||||||| ||||||  ||| |||||||||| a
      uugggucggucCAUC UCCCUU  GAA GUAUUCcuca a
cugagg               U      -A   C          c 

Annotation confidence High

Genome context

ref|NC_071442.1|: 124474954-124475045 [+]

Mature cja-miR-491-5p

• Accession: MIMAT0039375
• Description: Callithrix jacchus cja-miR-491-5p mature miRNA
• Sequence: 20 - AGUGGGGAACCCUUCCAUGAGGA - 42
• Evidence: experimental ; Illumina [1]

Mature cja-miR-491-3p

• Accession: MIMAT0061524
• Description: Callithrix jacchus cja-miR-491-3p mature miRNA
• Sequence: 54 - CUUAUGCAAGAUUCCCUUCUAC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857