miRBase entry: cja-mir-655

Stem-loop cja-mir-655

Accession

MI0031894

Description

Callithrix jacchus cja-mir-655 precursor miRNA

Sequence

gaggauauuugaggagagguuauccguguuauguucgcuucauucgucaugaAUAAUACAUGGUUAACCUCUUUuugaauaucagacuc
...(((((((((((((((((((.((((((..((((((...(....)...))))))..)))))).)))))))))))))))))))......

Structure

---gag                   u      ua      cuu a 
      gauauuugaggagagguua ccgugu  uguucg   c u
      ||||||||||||||||||| ||||||  ||||||   |  
      cuauaaguuUUUCUCCAAU GGUACA  AUAagu   g u
cucaga                   U      UA      acu c

Annotation confidence Not enough data

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Genome context

chr10: 126966930-126967018 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from cja-mir-655

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-655

Accession	MIMAT0039376
Description	Callithrix jacchus cja-miR-655 mature miRNA
Sequence	53 - AUAAUACAUGGUUAACCUCUUU - 74
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857