miRBase entry: cja-mir-376b

Stem-loop cja-mir-376b

Accession

MI0031903

Description

Callithrix jacchus cja-mir-376b precursor miRNA

Sequence

uuccagagcccaguccuucuuugguauuuaaaacguggauauuccuucuauguuuacgugauucuugguuaAUCAUAGAGGAAAAUCCAUGUuuucaguaucaaaugcugcuuuggaa
.((((((((..(((.....(((((((((.(((((((((((.(((((.(((((...((..........))....)))))))))).))))))))))).))))))))).))))))))))).

Structure

u        cc   ccuuc         u           a     u     -uuu  guga 
 uccagagc  agu     uuugguauu aaaacguggau uuccu cuaug    ac    u
 ||||||||  |||     ||||||||| ||||||||||| ||||| |||||    ||     
 agguuucg  ucg     aaacuauga uuuUGUACCUA AAGGA GAUAC    ug    u
a        --   ----u         c           A     -     UAau  guuc

Annotation confidence Not enough data

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Genome context

chr10: 126957703-126957820 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from cja-mir-376b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-376b

Accession	MIMAT0039384
Description	Callithrix jacchus cja-miR-376b mature miRNA
Sequence	72 - AUCAUAGAGGAAAAUCCAUGU - 92
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857