Stem-loop cja-mir-628

Accession

MI0031905

Description

Callithrix jacchus cja-mir-628 precursor miRNA

Sequence

648 reads, 62.0 reads per million, 1 experiments

cuuccucAUGCUGACAUAUUUACUAGAGGguaaaguuaauaaccuUCUAGUAAGAGUGGCAGUCGAAgggaag
((((((...((((.(((.(((((((((((((..........))))))))))))).))).))))....))))))

Structure

      -cAU    A   A             aaag 
cuuccu    GCUG CAU UUUACUAGAGGgu    u
||||||    |||| ||| |||||||||||||     
gaaggg    UGAC GUG GAAUGAUCUucca    u
      AAGC    G   A             auaa 

Annotation confidence High

Genome context

ref|NC_071451.1|: 38936316-38936388 [-]

Mature cja-miR-628-5p

• Accession: MIMAT0039386
• Description: Callithrix jacchus cja-miR-628-5p mature miRNA
• Sequence: 8 - AUGCUGACAUAUUUACUAGAGG - 29
• Evidence: experimental ; Illumina [1]

Mature cja-miR-628-3p

• Accession: MIMAT0061527
• Description: Callithrix jacchus cja-miR-628-3p mature miRNA
• Sequence: 46 - UCUAGUAAGAGUGGCAGUCGAA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857