Stem-loop cja-mir-186

Accession

MI0031907

Description

Callithrix jacchus cja-mir-186 precursor miRNA

Sequence

36726 reads, 3515.0 reads per million, 1 experiments

gcuuguaacuuucCAAAGAAUUCUCCUUUUGGGCUUucugguuuuauuuuaaGCCCAAAGGUGAAUUUUUUGGGaaguuugagc
(((((.(((((((((((((((((.(((((.((((((..............))))))))))).))))))))))))))))))))))

Structure

     u                 U     U      ucuggu 
gcuug aacuuucCAAAGAAUUC CCUUU GGGCUU      u
||||| ||||||||||||||||| ||||| ||||||       
cgagu uugaaGGGUUUUUUAAG GGAAA CCCGaa      u
     -                 U     -      uuuuau 

Annotation confidence High

Genome context

ref|NC_071448.1|: 105435876-105435959 [-]

Mature cja-miR-186-5p

• Accession: MIMAT0039388
• Description: Callithrix jacchus cja-miR-186-5p mature miRNA
• Sequence: 14 - CAAAGAAUUCUCCUUUUGGGCUU - 36
• Evidence: experimental ; Illumina [1-2]

Mature cja-miR-186-3p

• Accession: MIMAT0061529
• Description: Callithrix jacchus cja-miR-186-3p mature miRNA
• Sequence: 53 - GCCCAAAGGUGAAUUUUUUGGG - 74
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596