Stem-loop cja-mir-17

Accession

MI0031910

Description

Callithrix jacchus cja-mir-17 precursor miRNA

Literature search

1 open access papers mention cja-mir-17
(1 sentences)

Sequence

auaauguCAAAGUGCUUACAGUGCAGGUAGugauaugugcaucuacugcagugaaggcacuuguagcauuau
(((((((..((((((((.((.(((((.(((((.......)).)))))))).)).))))))))...)))))))

Structure

       -CA        A  G     G   -  au 
auaaugu   AAGUGCUU CA UGCAG UAG ug  a
|||||||   |||||||| || ||||| ||| ||  u
uauuacg   uucacgga gu acguc auc ac  g
       aug        a  g     -   u  gu 

Annotation confidence Not enough data

Genome context

chr1: 6514379-6514450 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cja-mir-17

Mature cja-miR-17

• Accession: MIMAT0039391
• Description: Callithrix jacchus cja-miR-17 mature miRNA
• Sequence: 8 - CAAAGUGCUUACAGUGCAGGUAG - 30
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596