miRBase entry: cja-mir-382

Stem-loop cja-mir-382

Accession

MI0031929

Description

Callithrix jacchus cja-mir-382 precursor miRNA

Sequence

gccgugguacuugaagaGAAGUUGUUCGUGGUGGAUUCGcuuuacuuaugacgaaucauucacggacaacacuuuuuucaguaccaaaugc
....(((((((.(((((((.(((((((((((..(((((((.........).))))))..)))))))))))..)))))))))))))).....

Structure

-gccg       u       -A           UG      - uuu 
     ugguacu gaagaGA  GUUGUUCGUGG  GAUUCG c   a
     ||||||| |||||||  |||||||||||  |||||| |   c
     accauga cuuuuuu  caacaggcacu  cuaagc g   u
cguaa       -       ca           ua      a uau

Annotation confidence Not enough data

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Genome context

chr10: 126971650-126971740 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from cja-mir-382

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-382

Accession	MIMAT0039409
Description	Callithrix jacchus cja-miR-382 mature miRNA
Sequence	18 - GAAGUUGUUCGUGGUGGAUUCG - 39
Evidence	experimental Illumina [1]

References

PubMed ID: 25038751
The common marmoset genome provides insight into primate biology and evolution
"Marmoset Genome Sequencing and Analysis Consortium"
"Nat Genet (2014) 46:850-857