Stem-loop cja-mir-144

Accession

MI0031933

Description

Callithrix jacchus cja-mir-144 precursor miRNA

Sequence

ggggcccuggcugGGAUAUCAUCAUAUACUGUAAGuuugcgaugagacacuacaguauagaugauguacuagucugggcaccc
(((((((.((((((.((((((((.(((((((((.((((......))))..))))))))))))))))).)))))).)))).)))

Structure

   -    u      G        A         -A    gc 
ggg gccc ggcugG AUAUCAUC UAUACUGUA  Guuu  g
||| |||| |||||| |||||||| |||||||||  ||||   
ccc cggg cugauc uguaguag auaugacau  caga  a
   a    u      a        -         ca    gu 

Annotation confidence Not enough data

Genome context

chr5: 95230319-95230401 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-144

Mature cja-miR-144

• Accession: MIMAT0039413
• Description: Callithrix jacchus cja-miR-144 mature miRNA
• Sequence: 14 - GGAUAUCAUCAUAUACUGUAAG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857