Stem-loop cja-mir-141

Accession

MI0031941

Description

Callithrix jacchus cja-mir-141 precursor miRNA

Sequence

ccgcccuggguccaucuuccaguacaguguuggauggucuaauugugaagcuccUAACACUGUCUGGUAAAGAUGGCccccgggucgg
((((((.(((.(((((((((((.(((((((((((...((.......))...))).))))))))))))..))))))).))).))).)))

Structure

   -   u   u       --    u        -   ugg  ua 
ccg ccc ggg ccaucuu  ccag acaguguu gga   uc  a
||| ||| ||| |||||||  |||| |||||||| |||   ||  u
ggc ggg ccc GGUAGAA  GGUC UGUCACAA ccu   ag  u
   u   c   C       AU    -        U   cga  ug 

Annotation confidence Not enough data

Genome context

chr9: 18818491-18818578 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-141

Mature cja-miR-141

• Accession: MIMAT0039422
• Description: Callithrix jacchus cja-miR-141 mature miRNA
• Sequence: 55 - UAACACUGUCUGGUAAAGAUGGC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857