Stem-loop cja-mir-582

Accession

MI0031943

Description

Callithrix jacchus cja-mir-582 precursor miRNA

Sequence

17 reads, 2.0 reads per million, 1 experiments

ucucucucuaguagaccacaacaagucagucugugcucuuugauuacaguuguucaaccaguuacuaaucuaacuaauugUAACUGGUUGAACAACUGAACCcaaagggugcaaaguagaaacauuucguugugaagucggcuggggacaaaga
(((.((((((((.(((((((((((((...(((((((((((((....(((((((((((((((((((..............)))))))))))))))))))....)))))))))).....)))...)))).))))))..))).))))))))...)))

Structure

   --c        a   --      -    cag   -----          auua                   uaaucu 
ucu   ucucuagu gac  cacaac aagu   ucu     gugcucuuug    caguuguucaaccaguuac      a
|||   |||||||| |||  |||||| ||||   |||     ||||||||||    |||||||||||||||||||       
aga   aggggucg cug  guguug uuua   aga     cgugggaaac    GUCAACAAGUUGGUCAAUg      a
   aac        g   aa      c    caa   ugaaa          CCAA                   uuaauc 

Annotation confidence Not enough data

Genome context

ref|NC_071443.1|: 146882659-146882812 [+]

Mature cja-miR-582-3p

• Accession: MIMAT0039424
• Description: Callithrix jacchus cja-miR-582-3p mature miRNA
• Sequence: 81 - UAACUGGUUGAACAACUGAACC - 102
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857