Stem-loop cja-mir-101-1

Accession

MI0031951

Description

Callithrix jacchus cja-mir-101-1 precursor miRNA

Sequence

45711 reads, 4375.0 reads per million, 1 experiments

ggcugcccuggcUCAGUUAUCACAGUGCUGAUGCUguccauucuaaagGUACAGUACUGUGAUAACUGAAggauggcagcc
(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....)))))))

Structure

       cuggc                  A    gucca 
ggcugcc     UCAGUUAUCACAGUGCUG UGCU     u
|||||||     |||||||||||||||||| ||||      
ccgacgg     AGUCAAUAGUGUCAUGAC AUGg     u
       uaggA                  -    aaauc 

Annotation confidence High

Genome context

ref|NC_071448.1|: 99374262-99374342 [-]

Mature cja-miR-101-1-5p

• Accession: MIMAT0061543
• Description: Callithrix jacchus cja-miR-101-1-5p mature miRNA
• Sequence: 13 - UCAGUUAUCACAGUGCUGAUGCU - 35
• Evidence: experimental ; Illumina [1-2]

Mature cja-miR-101-3p

• Accession: MIMAT0039430
• Description: Callithrix jacchus cja-miR-101-3p mature miRNA
• Sequence: 49 - GUACAGUACUGUGAUAACUGAA - 70
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596