Stem-loop cja-mir-217

Accession

MI0031957

Description

Callithrix jacchus cja-mir-217 precursor miRNA

Sequence

guuuuugaugucgcagaUACUGCAUCAGGAACUGAUUGGauaagaaucagucaccaucaguuccuaaugcauugccuucagcaucuaaac
((((..(((((.(.((.((.(((((.((((((((((.((((........))).).)))))))))).))))).)).)).).))))).))))

Structure

    uu     c c  a  C     C          U -   aag 
guuu  gaugu g ag UA UGCAU AGGAACUGAU G Gau   a
||||  ||||| | || || ||||| |||||||||| | |||    
caaa  cuacg c uc gu acgua uccuugacua c cug   a
    -u     a u  c  u     a          c a   acu 

Annotation confidence Not enough data

Genome context

chr14: 51389315-51389404 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-217

Mature cja-miR-217

• Accession: MIMAT0039436
• Description: Callithrix jacchus cja-miR-217 mature miRNA
• Sequence: 18 - UACUGCAUCAGGAACUGAUUGG - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857