Stem-loop cja-mir-29b-2

Accession

MI0031959

Description

Callithrix jacchus cja-mir-29b-2 precursor miRNA

Sequence

227950 reads, 21816.0 reads per million, 1 experiments

cuucuucaggaaGCUGGUUUCAUAUGGUGGUUUAGAuuuaaauagugauugucUAGCACCAUUUGAAAUCAGUGUUcuugggggag
((((((((((((((((((((((.((((((..((((((.............)))))))))))).)))))))))).))))))))))))

Structure

            -          U      GU      uuaaa 
cuucuucaggaa GCUGGUUUCA AUGGUG  UUAGAu     u
|||||||||||| |||||||||| ||||||  ||||||     a
gaggggguucUU UGACUAAAGU UACCAC  GAUcug     g
            G          U      --      uuagu 

Annotation confidence High

Genome context

ref|NC_071449.1|: 113646029-113646114 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-29b-2

Mature cja-miR-29b-2-5p

• Accession: MIMAT0061548
• Description: Callithrix jacchus cja-miR-29b-2-5p mature miRNA
• Sequence: 13 - GCUGGUUUCAUAUGGUGGUUUAGA - 36
• Evidence: experimental ; Illumina [1]

Mature cja-miR-29b-3p

• Accession: MIMAT0039437
• Description: Callithrix jacchus cja-miR-29b-3p mature miRNA
• Sequence: 54 - UAGCACCAUUUGAAAUCAGUGUU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857