Stem-loop cja-mir-15b

Accession

MI0031961

Description

Callithrix jacchus cja-mir-15b precursor miRNA

Literature search

1 open access papers mention cja-mir-15b
(1 sentences)

Sequence

ugaggccuuaaaguacugUAGCAGCACAUCAUGGUUUACAuacuacagucaagaugcgaaucauuauuugcugcucuagaaauuuaaggaaauuca
((((.(((((((...(((.(((((((.((.(((((((.(((.((.......))))).))))))).)).))))))).)))...)))))))...))))

Structure

    --g       gua   U       C  C       A   a  ac 
ugag   ccuuaaa   cug AGCAGCA AU AUGGUUU CAu cu  a
||||   |||||||   ||| ||||||| || ||||||| ||| ||  g
acuu   ggaauuu   gau ucgucgu ua uacuaag gua ga  u
    aaa       aaa   c       u  u       c   -  ac 

Annotation confidence Not enough data

Genome context

chr17: 16921311-16921406 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-15b

Mature cja-miR-15b

• Accession: MIMAT0039439
• Description: Callithrix jacchus cja-miR-15b mature miRNA
• Sequence: 19 - UAGCAGCACAUCAUGGUUUACA - 40
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596