Stem-loop cja-mir-16-1

Accession

MI0031963

Description

Callithrix jacchus cja-mir-16-1 precursor miRNA

Sequence

gucagcagugccuUAGCAGCACGUAAAUAUUGGCGuuaagauucuaaaauuaucuccaguauuaacugugcugcugaaguaagguugac
((((((..(((.((((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))).)))..))))))

Structure

      ag   c          -  A        C u   gauu 
gucagc  ugc uUAGCAGCAC GU AAUAUUGG G uaa    c
||||||  ||| |||||||||| || |||||||| | |||     
caguug  aug agucgucgug ca uuaugacc c auu    u
      ga   a          u  a        u u   aaaa 

Annotation confidence Not enough data

Genome context

chr1: 64832157-64832245 [+]

Mature cja-miR-16

• Accession: MIMAT0039440
• Description: Callithrix jacchus cja-miR-16 mature miRNA
• Sequence: 14 - UAGCAGCACGUAAAUAUUGGCG - 35
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596