Accession
MI0031963
Description
Callithrix jacchus
cja-mir-16-1 precursor miRNA
Sequence
192002
reads,
18376.0
reads per million, 1 experiments
gucagcagugccuUAGCAGCACGUAAAUAUUGGCGuuaagauucuaaaauuaucuCCAGUAUUAACUGUGCUGCUGAAguaagguugac
((((((..(((.((((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))).)))..))))))
((((((..(((.((((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))).)))..))))))
Structure
ag c - A C u gauu
gucagc ugc uUAGCAGCAC GU AAUAUUGG G uaa c
|||||| ||| |||||||||| || |||||||| | |||
caguug aug AGUCGUCGUG CA UUAUGACC c auu u
ga A U A u u aaaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ref|NC_071442.1|: 65214160-65214248 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-16-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cja-miR-16-5p
| Accession | MIMAT0039440 |
| Description | Callithrix jacchus cja-miR-16-5p mature miRNA |
| Sequence | 14 - UAGCAGCACGUAAAUAUUGGCG - 35 |
| Evidence |
experimental
Illumina [1-2] |
Mature cja-miR-16-1-3p
| Accession | MIMAT0061552 |
| Description | Callithrix jacchus cja-miR-16-1-3p mature miRNA |
| Sequence | 56 - CCAGUAUUAACUGUGCUGCUGAA - 78 |
| Evidence |
experimental
Illumina [1-2] |
References
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