Stem-loop cja-mir-411

Accession

MI0031968

Description

Callithrix jacchus cja-mir-411 precursor miRNA

Sequence

ugguacuuagagagaUAGUAGACCGUAUAGCGUACGcuuuaucugugacguauguaacacgguccacuaacccucaguauca
(((((((..(((.(.((((.((((((...((((((((.........).)))))))...)))))).)))).).))))))))))

Structure

       ua   a a    A      AUA       - uuu 
ugguacu  gag g UAGU GACCGU   GCGUACG c   a
|||||||  ||| | |||| ||||||   ||||||| |   u
acuauga  cuc c auca cuggca   uguaugc g   c
       --   c a    c      caa       a ugu 

Annotation confidence Not enough data

Genome context

chr10: 126940052-126940133 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from cja-mir-411

Mature cja-miR-411

• Accession: MIMAT0039445
• Description: Callithrix jacchus cja-miR-411 mature miRNA
• Sequence: 16 - UAGUAGACCGUAUAGCGUACG - 36
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596